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Query Data
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Option 1: load an existing template
mytemplate
test
yyuy
bla
blahu
hihi
haha
lethalgene
YAL003w
a
new
new1
new2
new3
new4
lethal
pp
ppi_gold
ppi_gold_1
new ppi
new ppi 1
temp
rrr
te
orfList
Option 2: create a new template
Dataset
Description
Select dataset
Properties
MIPS lethal genes
MIPS lethal genes
ORF
MIPS_essential
SGD ORF list
SGD list of all yeast ORFs (verified or putative)
ORF_name
Primary_SGDID
Feature_qualifier
Standard_gene_name
Alias
Secondary_SGDID
Chromosome
Start_coordinate
Stop_coordinate
Strand
Description
The platinum standard for PPI
Yeast protein-protein interaction "platinum standard" by Yu et al., 2004
Protein1
Protein2
SGD gene list
Systematic Name of the ORF, Gene Name, length from the first ATG to the stop codon (including any introns), and selected Gene Ontology (GO) annotations (not all GO annotations are included)
ORF
Gene_length
GO_biologi...al_process
GO_molecul...r_function
GO_cellula..._component
Linkhub
Linking various biological databases
identifier..._type_name
identifiers_type
identifiers_id
mappings_t...pe_synonym
mappings_t...ly_Mapping
resource_name
resource_description
resource_u...l_template
resource_group
resource_accept
resource_a...xcept_type
link_exception
The MIPS "gold standard" for PPI
Protein-protein interactions in MIPS
Protein1
Protein2
Option 3: compose a manual query
Query language:
SeRQL Select
SeRQL Construct
RDQL
RQL
Query:
Show linkouts to LinkHub
Yeast and worm interolog
Yeast gene essentiality and pseudogene content
Human gene essentiality and pseudogene content